CDS

Accession Number TCMCG077C27392
gbkey CDS
Protein Id KAF5752648.1
Location join(7655597..7656154,7656593..7656885,7656960..7657026,7657123..7657393,7657480..7657676,7657756..7657965,7658065..7658178,7658265..7658375,7658491..7658655,7658742..7659083,7659191..7659324,7659412..7659769,7659850..7660036,7660129..7660178,7660285..7660707,7660823..7661012,7661100..7661164,7661257..7661380,7661586..7661768,7661914..7662542)
Organism Tripterygium wilfordii
locus_tag HS088_TW01G00563

Protein

Length 1556aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA542587, BioSample:SAMN11634134
db_source JAAARO010000001.1
Definition DNA topoisomerase 2-like isoform X1 [Tripterygium wilfordii]
Locus_tag HS088_TW01G00563

EGGNOG-MAPPER Annotation

COG_category B
Description Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K03164        [VIEW IN KEGG]
EC 5.99.1.3        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko01524        [VIEW IN KEGG]
map01524        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000075        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0000819        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003916        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007093        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0007346        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031570        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044774        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045786        [VIEW IN EMBL-EBI]
GO:0045930        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCGGCGGAGAAGAAACTCCCTCTTCAGACGAGCAACAATGTCAACACGGCGGGGGCTCCTCAGAAGACGATCGAGGAGACCTACCAGAAGAAGACTCAACTGGAGCACATCTTGCTCCGTCCCGACACGTACATCGGCTCAATCGAGAAGCACACTCAGACTCTCTGGATCTACGAGAACGACGAGATCGTCCATCGATCCGTCTCATACGTTCCTGGTCTATACAAGATCTTCGACGAGATCCTCGTCAATGCAGCCGATAACAAGCAGAGAGACCCCAAGATGGACTCCTTGAAGGTGGTTATCGATGTGGAGCAGAACTTCATCAGCGTGTACAATAATGGAGATGGTGTGCCGGTGGAGATCCACCAGGAGGAGGGGGTTTATGTACCGGAGTTGATTTTTGGGCACCTCTTGACGAGCAGCAACTACGATGATAATGTGAAGAAGACCACTGGAGGAAGAAATGGATACGGTGCTAAGCTCACGAATATCTTCTCCACAGAGTTCGTTATCGAGACTGCTGATGGGAAGAGGCAGAAGAAGTACAAACAGGTCTTTGCGAACAACATGGGGAAAAAATCTGACCCTGTTATAAACAAGTGCAAGGAGGGTGAGAATTGGACAAAGGTTTCATTTAAGCCTGACTTGTCCAAGTTTAACATGAGCCATTTGGAAGATGACGTGGTTGCATTAATGAGAAAGCGGGTGTTTGACATGGCTGGGTGCCTTGGAAAGACTGTGAAGGTTGAACTGAATGGGAGTCGGGTCCCAATTAAATCGTTTATTGATTATGTGGATCTCTACCTACGTTCTGCCTCTAAATTCAGACAGGATCCACTTCCAAGAATTGTAGAGAAAGTCAATGACAGGTGGGAGGTCTGTGTGAGTCTTAGTGAAGGACAGTTTCAGCAGGTCAGCTTTGTTAATGGAATTGCTACAATCAAAGGTGGAACTCATGTTGATTATGTTACTAATCAGATCACTAACCATGTAATGGCTACTGTAAATAAGAAGAACAAGAACGCAAATGTGAAAGCCCATACTGTAAAGAATCACTTGTGGGTTTTTGTCAATGCTCTGATCGACAATCCTGCTTTTGATTCTCAAACTAAGGAAACGTTGACCCTTCGTCAAAGCAGTTTTGGGTCTAAATGTGAACTTTCAGATGAATTAATGAAGAAAGTTATAAAGTCGGGGATTGTGGAAAGTCTCCTCTCATGGGCCGATTTCAAGCAGAGCAAAGAGCTTAAGAAAACCGATGGAACAAAGACACAAAAGATTCAGGTTGAAAAGCTAGAGGATGCTAATGATGCTGGAGGAAGGAATTCTGATAAATGTACCTTGATTTTGACAGAGGGGGATTCAGCAAAGGCTCTTGCTATGGCGGGGTTGTCTATTGTGGGTCGGGACCACTATGGGGTGTTCCCTTTGAGAGGCAAGTTGCTGAATGTACGGGAAGCCACCCACACCCAGATCATGAACAACAAAGAAATTGAGAACATCAAGAGGATTCTTGGGCTACAGCAAAATAAGCAGTATGATAGCATCAAGTCCTTGAGATATGGCCATCTGATGATAATGACAGATCAGGACCATGATGGTTCCCACATCAAGGGCCTGTTGATCAACTTTATTCACTCTTTCTGGCCATCATTGCTGAAGATTCCGTCTTTCTTGGTTGAATTCATAACTCCAATTGTAAAGGCAACTCACAAAAATGGCACAGTTTTATCCTTTTATTCCATGCCCGAATATGAATCGTGGAAGGAAAGTTTTGGAGGGAGTGCAAGTGGTTGGTCGATAAAATACTATAAGGGGTTGGGAACAAGTACATCTAAGGAAGGTAAAGAGTACTTTGGCAATCTTGGTATGCACAAGAAAGATTTTGTATGGCAAGATGAGCAAGATGGTGAGGCAATTGAGCTTGCTTTCAGTAAGAAGAAGATTGAAGCAAGGAAGCAATGGCTCCGGCAGCTTGAGCCTGGTACCCACCTTGATCAGAAGGAGAAGCTCATAAAATACAGTGACTTTGTTAACAAGGAGCTAATATTGTTTTCCATGGCGGATCTTCAAAGATCAATTCCCTCAATGGTTGATGGTTTGAAGCCCGGTCAAAGGAAGATACTTTTTTGTTCCTTCAAGAGGAATTTTGTGAAAGAAGCAAAAGTTGCCCAATTTTCTGGTTATGTGTCAGAGCATTCTGCTTATCATCATGGTGAGCAGAGTCTTGCAAGTACCATCATTGGTATGGCACAGAATTATGTAGGCAGCAACAATATTAACCTTTTTCAACCAAATGGTCAATTTGGTACACGCAACATGGGAGGAAAAGATCATGCAAGTGCTAGATATTTATACACTCAGCTTTCTCCTATTACGCGGTTCTTGTTTCCAAGAGATGATGATAGGCTTCTTAACTACCTGAGTGAAGATGGGCAAACCATTGAACCCTCTTGGTACATGCCAATTATACCAATGGTTCTCGTCAATGGTAGTGAGGGAATTGGGACTGGATGGAGCTCTTACATCCCCAATTATAATCCAGCAGAAATAGTTGCTAACGTGAGGCGATTGCTTAAGGGTGAAATGATGGAGCCTATGCATCCATGGTATAAAGGATTTACAGGTAGTATTGAAAAAACTGCATCAAAGGAAGCTGGGTCCACCTACACAATCAGTGGGCGTATAGAGGAAGTCAATGAGACTATGCTTAGGGTGATAGAGCTTCCAGTCCGTAGGTGGACTCAAGATTATAAGGAATTTTTGCAATCAATCTCAGAAGGAAATAACAAAGCCATCAATCCATTCATTACGGAATTCAGGGAGCATAGTGACGATACAACTGTTGAGTTTGGGATCATTTTGTCAAAGGAGAACATGTTATTAGCCAAGCAAGAGGGTCTGGTGAAGAAATTTAAATTGACCACGACAATCAGCACAAGTAACATGCACTTGTTTGATTCGAACGGGGTTATTAAGAAATATGATACTCCAGAACAGATTCTTGAGGAATTTTTCCCCTTAAGGCTCGAATTTTATGAGAAAAGGAAGAAAATTCTTCTGGACAACCTTGAAATGGAATTGTTGAAATTGGAGAACCGGGTTAGGTTTATCCTTGGGGTTGTGAGTGGAGAAATAATTGTTAACAACAGGAAGAGAGCTGATCTGTTCCTGGAACTGCAACACAAAGGTTTCACCCCCTTTCCAAAGAAAACTAAATCTATTGAAGCCGCGGTTGCTGGGGCAACTGATGATACAGAAGACGTCGAGGATGATGTTGCATTAGCCAAAGGAGTACGCGCTAGTGATTATGACTATTTGTTATCCATGGCTATTGGAACCTTGACCCTTGAGAAGGTTCAGGAGCTCTGTGCTGATAAGGATAAGCTCAATCAGGAAGTAGATGATTTGAGGAAAGCAACTCCAAAGTCTTTGTGGATTAAAGACCTTGATGCTCTTGAGCAAGAACTCAATGAGCAAGATGTAAGTGATGCTGTTGCAGAGAAGGCCAGAAAGGAATTGAAAAACAAAGTAAGGAGTGAAGTTGCGACAAAGCCTGGTAGACAAGCCCCTAAAATCCCAAGAAAAAACACCAAAAAAGCCAACAACACAGTAGCTGTCACAGAGACTATGGGAGGATCAACCAGTTCTGCAATGGAAACAGATAATGTTCCGGTAGTGACGAAGCCAAAAGGAAGAGCAGCTTCAAAGAAGGCACCTAGTAGAAAGGAGAAAACCACCACTTTTGATGATGGTGGCGATGACGATGACGATGACGATGACATTGAATTACCTGAGCTAAGAGAACGACTTGCTGCCTATAACCTTGAATCTTCTTCTGACCAAACAGCTGCGATGGACCCTCATGTAACTGATGCAACAACTCGGAAGAAAGAACTCAGTAACCGCGTGGCTCAGAAGAATTTGCCAACCCAGTCGAAAACTTTGGATGGGGACAGTGATGAGGATGAAGTACTTGAGTTGAAAGAGCGTCTCGCTGCTTATAACCTTGATTCTTCTCCAGATCAATTGGCAGACTCCGCAGCTGAAGTTCCCAGTCTACAGGGAAGGAAGAAAGAGCCTAGAAAGAGGGCTGCTGCACAAAAGAAGCCTTTGGTAACAATATCAGAAAGTTCGGACGGTGAGGATCAGATCAGCATGGATGACAATGAAGATGATGATCTAGAAGTTGTAAGTGCCCATCAAGCTGGAAAGAAGGGAGGGAAAAAGGCAGCTGGAAATGCCAAGACAAGTAACAAACCCCCAGTGGCTACAAAGAAGAGAGGGATAGCTACCAAGCAGCCTAAGATAAGCCAGAAGCTTCTTACTGAGATGTTAAAGCCTGCAGAAAGTTCTGGGATTTCTCCAGAGAAGAAGGTGAGAAAGATGAGGGCATCACCATTTAACAAGAAAAGTGGCTCTTTATTGGGCAGGGTTAGCCAGAAAGACAAGGACCCTGAAATTGATGAATCCATGGGTTCTGCTTCCACAACTGACGACACTGAAGAAGTGACTGAAACACTTCCTGCAAGAGCTAGACCTTTGAGGGAAAAACGTAGACAGACAACGTATGTTGTGAGTGATTCTGACAGTGAGGAAGCTAATGAGGATTCTGACAGTGAGGAAGCTACTGAGGATTCTGATTTCAATGAAGATGAAGACTAG
Protein:  
MPAEKKLPLQTSNNVNTAGAPQKTIEETYQKKTQLEHILLRPDTYIGSIEKHTQTLWIYENDEIVHRSVSYVPGLYKIFDEILVNAADNKQRDPKMDSLKVVIDVEQNFISVYNNGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFVIETADGKRQKKYKQVFANNMGKKSDPVINKCKEGENWTKVSFKPDLSKFNMSHLEDDVVALMRKRVFDMAGCLGKTVKVELNGSRVPIKSFIDYVDLYLRSASKFRQDPLPRIVEKVNDRWEVCVSLSEGQFQQVSFVNGIATIKGGTHVDYVTNQITNHVMATVNKKNKNANVKAHTVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSDELMKKVIKSGIVESLLSWADFKQSKELKKTDGTKTQKIQVEKLEDANDAGGRNSDKCTLILTEGDSAKALAMAGLSIVGRDHYGVFPLRGKLLNVREATHTQIMNNKEIENIKRILGLQQNKQYDSIKSLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATHKNGTVLSFYSMPEYESWKESFGGSASGWSIKYYKGLGTSTSKEGKEYFGNLGMHKKDFVWQDEQDGEAIELAFSKKKIEARKQWLRQLEPGTHLDQKEKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQNYVGSNNINLFQPNGQFGTRNMGGKDHASARYLYTQLSPITRFLFPRDDDRLLNYLSEDGQTIEPSWYMPIIPMVLVNGSEGIGTGWSSYIPNYNPAEIVANVRRLLKGEMMEPMHPWYKGFTGSIEKTASKEAGSTYTISGRIEEVNETMLRVIELPVRRWTQDYKEFLQSISEGNNKAINPFITEFREHSDDTTVEFGIILSKENMLLAKQEGLVKKFKLTTTISTSNMHLFDSNGVIKKYDTPEQILEEFFPLRLEFYEKRKKILLDNLEMELLKLENRVRFILGVVSGEIIVNNRKRADLFLELQHKGFTPFPKKTKSIEAAVAGATDDTEDVEDDVALAKGVRASDYDYLLSMAIGTLTLEKVQELCADKDKLNQEVDDLRKATPKSLWIKDLDALEQELNEQDVSDAVAEKARKELKNKVRSEVATKPGRQAPKIPRKNTKKANNTVAVTETMGGSTSSAMETDNVPVVTKPKGRAASKKAPSRKEKTTTFDDGGDDDDDDDDIELPELRERLAAYNLESSSDQTAAMDPHVTDATTRKKELSNRVAQKNLPTQSKTLDGDSDEDEVLELKERLAAYNLDSSPDQLADSAAEVPSLQGRKKEPRKRAAAQKKPLVTISESSDGEDQISMDDNEDDDLEVVSAHQAGKKGGKKAAGNAKTSNKPPVATKKRGIATKQPKISQKLLTEMLKPAESSGISPEKKVRKMRASPFNKKSGSLLGRVSQKDKDPEIDESMGSASTTDDTEEVTETLPARARPLREKRRQTTYVVSDSDSEEANEDSDSEEATEDSDFNEDED